BLASTN 1.4.9MP [26-March-1996] [Build 14:27:07 Apr 1 1996] Reference: Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10. Notice: this program and its default parameter settings are optimized to find nearly identical sequences rapidly. To identify weak similarities encoded in nucleic acid, use BLASTX, TBLASTN or TBLASTX. Query= tmpseq_1 (1125 letters) Database: Non-redundant GenBank+EMBL+DDBJ+PDB sequences 349,525 sequences; 540,957,745 total letters. Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N emb|X89739|LMGPDGENE L.mexicana DNA for gpd gene 5625 0.0 1 emb|X91142|TBGNDG3PD T.brucei glycosomal NAD-dependent ... 1807 2.6e-141 1 emb|X89738|TBGPDGENE T.brucei DNA for gpd gene 1798 6.4e-140 1 gb|U12977|PLU12977 Pseudomonas lemoignei poly(3-hydro... 429 6.5e-25 1 gb|I35633|I35633 Sequence 2 from patent US 5602016 154 0.054 1 dbj|D00809|FSODAO F.solani mRNA for D-amino acid oxi... 154 0.055 1 gb|I35632|I35632 Sequence 1 from patent US 5602016 154 0.055 1 emb|X76859|SCGPD1 S.cerevisiae GPD1 gene 152 0.080 1 gb|U04621|SCU04621 Saccharomyces cerevisiae dihydroxy... 152 0.081 1 emb|Z24454|SCGPD1A S.cerevisiae glycerol 3-phosphate ... 152 0.081 1 emb|Z74071|SCYDL023C S.cerevisiae chromosome IV reading... 152 0.083 1 emb|Z48432|SCCHRIV42 S. cerevisiae chromosome IV left a... 152 0.085 1 emb|X73036|CCGAPCD C.crispus GapC gene for glycolytic... 151 0.099 1 dbj|E06907|E06907 DNA encoding Streptomyces carbophi... 146 0.23 1 dbj|D30815|STMCYP450 Streptomyces carbophilus gene for ... 146 0.23 1 emb|Z96800|MTCY63 Mycobacterium tuberculosis cosmid Y63 144 0.34 1 emb|X73034|CCGAPC C.crispus mRNA for glycolytic glyc... 142 0.43 1 gb|U68036|SCU68036 Streptomyces coelicolor bldKA, bld... 139 0.66 1 gb|U73305|MMU73305 Mycobacterium mageritense superoxi... 137 0.72 1 gb|M38373|HLFGYRB Haloferax alicantei DNA gyrase sub... 137 0.79 1 emb|Z92669|MTCY8D5 Mycobacterium tuberculosis cosmid ... 116 0.79 2 gb|L26977|HLFINSVECA Shuttle vector pMDS20, complete se... 137 0.79 1 gb|L26978|HLFINSVECB Haloferax volcanii gene. 137 0.79 1 gb|U08602|SSU08602 Streptomyces sp. alpha-amylase (am... 130 0.997 1 gb|U86087|MSU86087 Mycobacterium senegalense superoxi... 128 0.9994 1 gb|U43775|GCU43775 Glomerella cingulata secreted aspa... 128 0.9998 1 gb|AC002073|HSAC002073 Human PAC clone DJ515N1 from 22q11... 128 0.9999 1 emb|X89739|LMGPDGENE L.mexicana DNA for gpd gene Length = 2017 Plus Strand HSPs: Score = 5625 (1554.3 bits), Expect = 0.0, P = 0.0 Identities = 1125/1125 (100%), Positives = 1125/1125 (100%), Strand = Plus / Plus Query: 1 ATGTCAACGAAGCAGCACAGCGCTAAGGATGAGCTGTTGTACCTGAACAAGGCCGTCGTC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 ATGTCAACGAAGCAGCACAGCGCTAAGGATGAGCTGTTGTACCTGAACAAGGCCGTCGTC 702 Query: 61 TTCGGCTCCGGTGCCTTTGGTACGGCGCTGGCGATGGTGCTCTCCAAGAAGTGCCGTGAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 703 TTCGGCTCCGGTGCCTTTGGTACGGCGCTGGCGATGGTGCTCTCCAAGAAGTGCCGTGAG 762 Query: 121 GTGTGCGTGTGGCACATGAACGAGGAGGAGGTGCGTCTCGTGAATGAGAAACGTGAGAAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 763 GTGTGCGTGTGGCACATGAACGAGGAGGAGGTGCGTCTCGTGAATGAGAAACGTGAGAAT 822 Query: 181 GTCCTATTCCTCAAGGGAGTGCAACTGGCGTCGAACATCACTTTCACCTCCGATGTGGAA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 823 GTCCTATTCCTCAAGGGAGTGCAACTGGCGTCGAACATCACTTTCACCTCCGATGTGGAA 882 Query: 241 AAGGCGTACAATGGTGCCGAGATCATTCTCTTCGTCATCCCGACACAGTTCCTGCGCGGC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 883 AAGGCGTACAATGGTGCCGAGATCATTCTCTTCGTCATCCCGACACAGTTCCTGCGCGGC 942 Query: 301 TTCTTCGAGAAAAGCGGTGGCAACCTGATCGCCTACGCAAAGGAGAAGCAGGTTCCGGTG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 TTCTTCGAGAAAAGCGGTGGCAACCTGATCGCCTACGCAAAGGAGAAGCAGGTTCCGGTG 1002 Query: 361 CTTGTGTGCACAAAGGGTATTGAGCGCTCGACGCTGAAGTTCCCCGCAGAGATTATTGGC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1003 CTTGTGTGCACAAAGGGTATTGAGCGCTCGACGCTGAAGTTCCCCGCAGAGATTATTGGC 1062 Query: 421 GAATTCCTCCCGAGCCCCCTGCTTTCTGTGCTCGCGGGCCCCAGCTTTGCCATCGAGGTG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1063 GAATTCCTCCCGAGCCCCCTGCTTTCTGTGCTCGCGGGCCCCAGCTTTGCCATCGAGGTG 1122 Query: 481 GCCACCGGCGTCTTCACGTGCGTCAGCATCGCCTCCGCCGACATCAATGTGGCTCGCCGC 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1123 GCCACCGGCGTCTTCACGTGCGTCAGCATCGCCTCCGCCGACATCAATGTGGCTCGCCGC 1182 Query: 541 CTACAGCGAATCATGTCTACAGGCGACCGCTCCTTCGTGTGCTGGGCCACCACCGACACC 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1183 CTACAGCGAATCATGTCTACAGGCGACCGCTCCTTCGTGTGCTGGGCCACCACCGACACC 1242 Query: 601 GTCGGCTGCGAGGTGGCCAGCGCCGTGAAGAACGTTCTGGCCATCGGCTCTGGTGTAGCG 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1243 GTCGGCTGCGAGGTGGCCAGCGCCGTGAAGAACGTTCTGGCCATCGGCTCTGGTGTAGCG 1302 Query: 661 AATGGCCTCGGCATGGGCCTCAACGCGCGTGCCGCCCTAATCATGCGGGGCCTGCTCGAG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1303 AATGGCCTCGGCATGGGCCTCAACGCGCGTGCCGCCCTAATCATGCGGGGCCTGCTCGAG 1362 Query: 721 ATTCGAGATCTGACAGCCGCGCTGGGCGGCGATGGCAGTGCCGTCTTCGGCCTCGCCGGC 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1363 ATTCGAGATCTGACAGCCGCGCTGGGCGGCGATGGCAGTGCCGTCTTCGGCCTCGCCGGC 1422 Query: 781 CTCGGCGACCTCCAACTGACGTGCTCGTCTGAGCTGTCGCGTAACTTCACGGTGGGCAAG 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1423 CTCGGCGACCTCCAACTGACGTGCTCGTCTGAGCTGTCGCGTAACTTCACGGTGGGCAAG 1482 Query: 841 AAACTGGGCAAGGGTTTGCCTATCGAGGAAATTCAACGCACAAGCAAGGCTGTCGCGGAG 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1483 AAACTGGGCAAGGGTTTGCCTATCGAGGAAATTCAACGCACAAGCAAGGCTGTCGCGGAG 1542 Query: 901 GGTGTGGCGACAGCCGATCCGCTGATGCGCTTGGCAAAGCAGTTGAAGGTGAAGATGCCC 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1543 GGTGTGGCGACAGCCGATCCGCTGATGCGCTTGGCAAAGCAGTTGAAGGTGAAGATGCCC 1602 Query: 961 CTGTGCCATCAAATCTACGAGATCGTCTACAAGAAGAAGAACCCGCGCGACGCTCTTGCT 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1603 CTGTGCCATCAAATCTACGAGATCGTCTACAAGAAGAAGAACCCGCGCGACGCTCTTGCT 1662 Query: 1021 GATCTCTTGTCATGTGGCCTGCAAGACGAGGGCCTGCCGCCGCTCTTCAAGAGGTCAGCT 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1663 GATCTCTTGTCATGTGGCCTGCAAGACGAGGGCCTGCCGCCGCTCTTCAAGAGGTCAGCT 1722 Query: 1081 TCCACCCCCTCCAAACTCTGAGGTGGAAAAAGCCGCACGCTGCTG 1125 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1723 TCCACCCCCTCCAAACTCTGAGGTGGAAAAAGCCGCACGCTGCTG 1767 emb|X91142|TBGNDG3PD T.brucei glycosomal NAD-dependent glycerol 3-phosphate dehydrogenase gene Length = 1065 Plus Strand HSPs: Score = 1807 (499.3 bits), Expect = 2.6e-141, P = 2.6e-141 Identities = 619/941 (65%), Positives = 619/941 (65%), Strand = Plus / Plus Query: 40 TACCTGAACAAGGCCGTCGTCTTCGGCTCCGGTGCCTTTGGTACGGCGCTGGCGATGGTG 99 || ||||| | | || |||||| || ||||| ||||| || |||||| || Sbjct: 19 TATCTGAAGCGCGGTGCGGTGTTCGGCAGTGGCGCCTTCGGTACCGCTCTGGCGTGCGTC 78 Query: 100 CTCTCCAAGAAGTGCCGTGAGGTGTGCGTGTGGCACATGAACGAGGAGGAGGTGCGTCTC 159 || | |||||||| |||| ||| ||||| ||||||| | |||| ||| | Sbjct: 79 CTTGCAAAGAAGTGTGAGTCTGTGTCCGTATGGCATATGAACGCCAATGAGGCCCGTGTT 138 Query: 160 GTGAATGAGAAACGTGAGAATGTCCTATTCCTCAAGGGAGTGCAACTGGCGTCGAACATC 219 ||||| |||| | || || || ||||| || | | || | | ||| | Sbjct: 139 GTGAACCAGAAGCACGAAAACGTATATTTCCTTCCCGGTGCACCGCTTCCAGCTAACCTT 198 Query: 220 ACTTTCACCTCCGATGTGGAAAAGGCGTACAATGGTGCCGAGATCATTCTCTTCGTCATC 279 || ||||| |||||| || || || ||||| ||||| | |||||||||||| Sbjct: 199 ACCTTCACGGCCGATGCTGAGGAGTGCGCGAAAGGTGCGGAGATTGTCCTCTTCGTCATC 258 Query: 280 CCGACACAGTTCCTGCGCGGCTTCTTCGAGAAAAGCGGTGGCAACCTGATCGCCTACGCA 339 ||||| |||||||| ||||| ||| || |||| | | | || ||| | | ||| Sbjct: 259 CCGACGCAGTTCCTCCGCGGGTTCCTCCAGAAGAACAGCCACATCCTCCGCAACCACGTT 318 Query: 340 AAGGAGAAGCAGGTTCCGGTGCTTGTGTGCACAAAGGGTATTGAGCGCTCGACGCTGAAG 399 | || || ||| | |||||| ||||| || |||||||| | || Sbjct: 319 GTTTCCCGCAACGTGCCCGTGGTGATGTGCAGCAAGGGCATCGAGCGCTCCTCCCTCCTC 378 Query: 400 TTCCCCGCAGAGATTATTGGCGAATTCCTCCCGAGCCCCCTGCTTTCTGTGCTCGCGGGC 459 ||||||||| |||| | | || ||||| || | | | | ||| | || ||| Sbjct: 379 TTCCCCGCACAGATCTTGGAGGAGTTCCTGCCCAACTATCCAATCGGTGTTATTGCTGGC 438 Query: 460 CCCAGCTTTGCCATCGAGGTGGCCACCGGCGTCTTCACGTGCGTCAGCATCGCCTCCGCC 519 || || ||||| || || || | || | | || || ||| ||| | ||| Sbjct: 439 CCTTCATTCGCCATTGAAGTTGCTAAGGGAATGCTGACAAATGTTTGCACTGCCGCGGCC 498 Query: 520 GACATCAATGTGGCTCGCCGCCTACAGCGAATCATGTCTACAGGCGACCGCTCCTTCGTG 579 |||||| | |||| || | ||| |||||||| | ||| |||| |||||||| Sbjct: 499 GACATCGACATGGCACGAAAGATTCAGAGAATCATGACCACATCCGACGGCTCCTTCCGT 558 Query: 580 TGCTGGGCCACCACCGACACCGTCGGCTGCGAGGTGGCCAGCGCCGTGAAGAACGTTCTG 639 |||||||| |||||||| |||| |||||| | || |||||| ||||||| || || Sbjct: 559 TGCTGGGCAACCACCGATGTTATCGGATGCGAGATCGCAAGCGCCATGAAGAATGTGCTT 618 Query: 640 GCCATCGGCTCTGGTGTAGCGAATGGCCTCGGCATGGGCCTCAACGCGCGTGCCGCCCTA 699 ||||| | ||| |||| | || || || || | | ||| || || || ||||| Sbjct: 619 GCCATTGCCTCAGGTGCACTAAAGGGACTTGGAACTGAGAACAATGCCCGCGCTGCCCTC 678 Query: 700 ATCATGCGGGGCCTGCTCGAGATTCGAGATCTGACAGCCGCGCTGGGCGGCGATGGCAGT 759 ||| || || || ||||| || || || ||||| || || |||||| || Sbjct: 679 ATCTCTCGTGGTCTTCTCGAAATCCGTGACCTGACCTTGGCACTTGGCGGCACGGGTGAG 738 Query: 760 GCCGTCTTCGGCCTCGCCGGCCTCGGCGACCTCCAACTGACGTGCTCGTCTGAGCTGTCG 819 || ||||||||||| |||||||||| ||| | | || || ||||| || || || || Sbjct: 739 GCTGTCTTCGGCCTTCCCGGCCTCGGTGACTTACTGCTCACCTGCTCTTCAGAACTCTCA 798 Query: 820 CGTAACTTCACGGTGGGCAAGAAACTGGGCAAGGGTTTGCCTATCGAGGAAATTCAACGC 879 |||||||| |||||||||| ||| || ||||| || | | |||| || || | ||| Sbjct: 799 CGTAACTTTACGGTGGGCATGAAGCTCGGCAAAGGCATTTCCCTCGAAGAGATCAAGCGC 858 Query: 880 ACAAGCAAGGCTGTCGCGGAGGGTGTGGCGACAGCCGATCCGCTGATGCGCTTGGCAAAG 939 || |||||||| || || |||||||| || || || || |||||| ||| | || ||| Sbjct: 859 ACCAGCAAGGCCGTTGCTGAGGGTGTTGCAACCGCTGAGCCGCTGGAGCGACTCGCCAAG 918 Query: 940 CAGTTGAAGGTGAAGATGCCCCTGTGCCATCAAATCTACGA 980 || || ||| | | ||| | |||||| | ||||| | Sbjct: 919 AAGCACAACGTGCACCTCCCCATATGCCATGAGGTCTACAA 959 emb|X89738|TBGPDGENE T.brucei DNA for gpd gene Length = 1580 Plus Strand HSPs: Score = 1798 (496.8 bits), Expect = 6.4e-140, P = 6.4e-140 Identities = 618/941 (65%), Positives = 618/941 (65%), Strand = Plus / Plus Query: 40 TACCTGAACAAGGCCGTCGTCTTCGGCTCCGGTGCCTTTGGTACGGCGCTGGCGATGGTG 99 || ||||| | | || |||||| || ||||| ||||| || |||||| || Sbjct: 175 TATCTGAAGCGCGGTGCGGTGTTCGGCAGTGGCGCCTTCGGTACCGCTCTGGCGTGCGTC 234 Query: 100 CTCTCCAAGAAGTGCCGTGAGGTGTGCGTGTGGCACATGAACGAGGAGGAGGTGCGTCTC 159 || | |||||||| |||| ||| ||||| ||||||| | |||| ||| | Sbjct: 235 CTTGCAAAGAAGTGTGAGTCTGTGTCCGTATGGCATATGAACGCCAATGAGGCCCGTGTT 294 Query: 160 GTGAATGAGAAACGTGAGAATGTCCTATTCCTCAAGGGAGTGCAACTGGCGTCGAACATC 219 ||||| |||| | || || || ||||| || | | || | | ||| | Sbjct: 295 GTGAACCAGAAGCACGAAAACGTATATTTCCTTCCCGGTGCACCGCTTCCAGCTAACCTT 354 Query: 220 ACTTTCACCTCCGATGTGGAAAAGGCGTACAATGGTGCCGAGATCATTCTCTTCGTCATC 279 || ||||| |||||| || || || ||||| ||||| | |||||||||||| Sbjct: 355 ACCTTCACGGCCGATGCTGAGGAGTGCGCGAAAGGTGCGGAGATTGTCCTCTTCGTCATC 414 Query: 280 CCGACACAGTTCCTGCGCGGCTTCTTCGAGAAAAGCGGTGGCAACCTGATCGCCTACGCA 339 ||||| |||||||| ||||| ||| || |||| | | | || ||| | | ||| Sbjct: 415 CCGACGCAGTTCCTCCGCGGGTTCCTCCAGAAGAACAGCCACATCCTCCGCAACCACGTT 474 Query: 340 AAGGAGAAGCAGGTTCCGGTGCTTGTGTGCACAAAGGGTATTGAGCGCTCGACGCTGAAG 399 | || || ||| | |||||| ||||| || |||||||| | || Sbjct: 475 GTTTCCCGCAACGTGCCCGTGGTGATGTGCAGCAAGGGCATCGAGCGCTCCTCCCTCCTC 534 Query: 400 TTCCCCGCAGAGATTATTGGCGAATTCCTCCCGAGCCCCCTGCTTTCTGTGCTCGCGGGC 459 ||||||||| |||| | | || ||||| || | | | | ||| | || ||| Sbjct: 535 TTCCCCGCACAGATCTTGGAGGAGTTCCTGCCCAACTATCCAATCGGTGTTATTGCTGGC 594 Query: 460 CCCAGCTTTGCCATCGAGGTGGCCACCGGCGTCTTCACGTGCGTCAGCATCGCCTCCGCC 519 || || ||||| || || || | || | | || || ||| ||| | ||| Sbjct: 595 CCTTCATTCGCCATTGAAGTTGCTAAGGGAATGCTGACAAATGTTTGCACTGCCGCGGCC 654 Query: 520 GACATCAATGTGGCTCGCCGCCTACAGCGAATCATGTCTACAGGCGACCGCTCCTTCGTG 579 |||||||| |||| || | ||| |||||||| | ||| |||| |||||||| Sbjct: 655 GACATCAACATGGCACGAAAGATTCAGAGAATCATGACCACATCCGACGGCTCCTTCCGT 714 Query: 580 TGCTGGGCCACCACCGACACCGTCGGCTGCGAGGTGGCCAGCGCCGTGAAGAACGTTCTG 639 |||||||| |||||||| |||| |||||| | || |||||| ||||||| || || Sbjct: 715 TGCTGGGCAACCACCGATGTTATCGGATGCGAGATCGCAAGCGCCATGAAGAATGTGCTT 774 Query: 640 GCCATCGGCTCTGGTGTAGCGAATGGCCTCGGCATGGGCCTCAACGCGCGTGCCGCCCTA 699 ||||| | ||| |||| | || || || || | | ||| || || || ||||| Sbjct: 775 GCCATTGCCTCAGGTGCACTAAAGGGACTTGGAACTGAGAACAATGCCCGCGCTGCCCTC 834 Query: 700 ATCATGCGGGGCCTGCTCGAGATTCGAGATCTGACAGCCGCGCTGGGCGGCGATGGCAGT 759 ||| || || || ||||| || || || ||||| || || |||||| || Sbjct: 835 ATCTCTCGTGGTCTTCTCGAAATCCGTGACCTGACCCTGGCACTTGGCGGCACGGGTGAG 894 Query: 760 GCCGTCTTCGGCCTCGCCGGCCTCGGCGACCTCCAACTGACGTGCTCGTCTGAGCTGTCG 819 || ||||||||||| |||||||||||||| | | || || ||||| || || || || Sbjct: 895 GCTGTCTTCGGCCTTCCCGGCCTCGGCGACTTACTGCTCACCTGCTCTTCAGAACTCTCA 954 Query: 820 CGTAACTTCACGGTGGGCAAGAAACTGGGCAAGGGTTTGCCTATCGAGGAAATTCAACGC 879 |||||||| |||||||||| ||| || ||| | || | | |||| || || | ||| Sbjct: 955 CGTAACTTTACGGTGGGCATGAAGCTCGGCCAAGGCATTTCCCTCGAAGAGATCAAGCGC 1014 Query: 880 ACAAGCAAGGCTGTCGCGGAGGGTGTGGCGACAGCCGATCCGCTGATGCGCTTGGCAAAG 939 || |||||||| || || |||||||| || || || || |||||| ||| | || ||| Sbjct: 1015 ACCAGCAAGGCCGTTGCTGAGGGTGTTGCAACCGCTGAACCGCTGGAGCGACTCGCCAAG 1074 Query: 940 CAGTTGAAGGTGAAGATGCCCCTGTGCCATCAAATCTACGA 980 || || | | | ||| | |||||| | ||||| | Sbjct: 1075 AAGCACAACGCTGACCTCCCCATATGCCATGAGGTCTACAA 1115 gb|U12977|PLU12977 Pseudomonas lemoignei poly(3-hydroxybutyrate) depolymerase A precursor (phaZ5) gene, complete cds, and glycerol-3-phosphate-dehydrogenase homolog, complete cds. Length = 3704 Plus Strand HSPs: Score = 429 (118.5 bits), Expect = 6.5e-25, P = 6.5e-25 Identities = 169/273 (61%), Positives = 169/273 (61%), Strand = Plus / Plus Query: 595 GACACCGTCGGCTGCGAGGTGGCCAGCGCCGTGAAGAACGTTCTGGCCATCGGCTCTGGT 654 ||| || ||| |||||| | | |||| || ||||| | ||||| || | | | || Sbjct: 665 GACGTGGTGGGCGTCGAGGTCGGCGGCGCGGTCAAGAATATCCTGGCGATTGCCACCGGC 724 Query: 655 GTAGCGAATGGCCTCGGCATGGGCCTCAACGCGCGTGCCGCCCTAATCATGCGGGGCCTG 714 | ||||| | || |||| || || |||||||| || || || | ||| |||||| Sbjct: 725 ATCCTCGATGGCATGAGCCTGGGGCTGAATGCGCGTGCGGCGCTCATTACGCGCGGCCTG 784 Query: 715 CTCGAGATTCGAGATCTGACAGCCGCGCTGGGCGGCGATGGCAGTGCCGTCTTCGGCCTC 774 ||||| ||| ||| || |||| | || | || || | || || Sbjct: 785 GCGGAGATCACCCGTCTCGGCATCGCCCTTGGCGCCCGTGCCGAAACCTTCATGGGACTG 844 Query: 775 GCCGGCCTCGGCGACCTCCAACTGACGTGCTCGTCTGAGCTGTCGCGTAACTTCACGGTG 834 ||||| ||||||||||| || || || | || ||||||||||| | || Sbjct: 845 GCCGGTGTCGGCGACCTCATTCTCACCTGTACCGGCGATTTGTCGCGTAACCGTAAAGTC 904 Query: 835 GGCAAGAAACTGGGCAAGGGTTTGCCTATCGAG 867 || | ||||| |||| ||| | ||| Sbjct: 905 GGTCTGGGACTGGCTCAGGGCAAGCCCCTGGAG 937 gb|I35633|I35633 Sequence 2 from patent US 5602016 Length = 1086 Plus Strand HSPs: Score = 154 (42.6 bits), Expect = 0.056, P = 0.054 Identities = 46/65 (70%), Positives = 46/65 (70%), Strand = Plus / Plus Query: 46 AACAAGGCCGTCGTCTTCGGCTCCGGTGCCTTTGGTACGGCGCTGGCGATGGTGCTCTCC 105 |||| ||||||| | || |||||| | |||| | || ||| || |||||||| Sbjct: 7 AACACAATCGTCGTCGTTGGTGCCGGTGTCATTGGCTTGACGTCGGCCTTGTTGCTCTCC 66 Query: 106 AAGAA 110 ||||| Sbjct: 67 AAGAA 71 dbj|D00809|FSODAO F.solani mRNA for D-amino acid oxidase Length = 1186 Plus Strand HSPs: Score = 154 (42.6 bits), Expect = 0.056, P = 0.055 Identities = 46/65 (70%), Positives = 46/65 (70%), Strand = Plus / Plus Query: 46 AACAAGGCCGTCGTCTTCGGCTCCGGTGCCTTTGGTACGGCGCTGGCGATGGTGCTCTCC 105 |||| ||||||| | || |||||| | |||| | || ||| || |||||||| Sbjct: 48 AACACAATCGTCGTCGTTGGTGCCGGTGTCATTGGCTTGACGTCGGCCTTGTTGCTCTCC 107 Query: 106 AAGAA 110 ||||| Sbjct: 108 AAGAA 112 gb|I35632|I35632 Sequence 1 from patent US 5602016 Length = 1298 Plus Strand HSPs: Score = 154 (42.6 bits), Expect = 0.057, P = 0.055 Identities = 46/65 (70%), Positives = 46/65 (70%), Strand = Plus / Plus Query: 46 AACAAGGCCGTCGTCTTCGGCTCCGGTGCCTTTGGTACGGCGCTGGCGATGGTGCTCTCC 105 |||| ||||||| | || |||||| | |||| | || ||| || |||||||| Sbjct: 72 AACACAATCGTCGTCGTTGGTGCCGGTGTCATTGGCTTGACGTCGGCCTTGTTGCTCTCC 131 Query: 106 AAGAA 110 ||||| Sbjct: 132 AAGAA 136 emb|X76859|SCGPD1 S.cerevisiae GPD1 gene Length = 1380 Plus Strand HSPs: Score = 152 (42.0 bits), Expect = 0.084, P = 0.080 Identities = 52/79 (65%), Positives = 52/79 (65%), Strand = Plus / Plus Query: 620 GCGCCGTGAAGAACGTTCTGGCCATCGGCTCTGGTGTAGCGAATGGCCTCGGCATGGGCC 679 | || ||||||||||| | ||| | || | |||| | | | || || ||| ||| Sbjct: 827 GTGCTTTGAAGAACGTTGTTGCCTTAGGTTGTGGTTTCGTCGAAGGTCTAGGCTGGGGTA 886 Query: 680 TCAACGCGCGTGCCGCCCT 698 |||||| ||| ||| | Sbjct: 887 ACAACGCTTCTGCTGCCAT 905 gb|U04621|SCU04621 Saccharomyces cerevisiae dihydroxyacetone phosphate reductase (DAR1) gene, complete cds. Length = 1653 Plus Strand HSPs: Score = 152 (42.0 bits), Expect = 0.085, P = 0.081 Identities = 52/79 (65%), Positives = 52/79 (65%), Strand = Plus / Plus Query: 620 GCGCCGTGAAGAACGTTCTGGCCATCGGCTCTGGTGTAGCGAATGGCCTCGGCATGGGCC 679 | || ||||||||||| | ||| | || | |||| | | | || || ||| ||| Sbjct: 1057 GTGCTTTGAAGAACGTTGTTGCCTTAGGTTGTGGTTTCGTCGAAGGTCTAGGCTGGGGTA 1116 Query: 680 TCAACGCGCGTGCCGCCCT 698 |||||| ||| ||| | Sbjct: 1117 ACAACGCTTCTGCTGCCAT 1135 emb|Z24454|SCGPD1A S.cerevisiae glycerol 3-phosphate dehydrogenase gene, complete CDS. Length = 1732 Plus Strand HSPs: Score = 152 (42.0 bits), Expect = 0.085, P = 0.081 Identities = 52/79 (65%), Positives = 52/79 (65%), Strand = Plus / Plus Query: 620 GCGCCGTGAAGAACGTTCTGGCCATCGGCTCTGGTGTAGCGAATGGCCTCGGCATGGGCC 679 | || ||||||||||| | ||| | || | |||| | | | || || ||| ||| Sbjct: 1045 GTGCTTTGAAGAACGTTGTTGCCTTAGGTTGTGGTTTCGTCGAAGGTCTAGGCTGGGGTA 1104 Query: 680 TCAACGCGCGTGCCGCCCT 698 |||||| ||| ||| | Sbjct: 1105 ACAACGCTTCTGCTGCCAT 1123 emb|Z74071|SCYDL023C S.cerevisiae chromosome IV reading frame ORF YDL023c Length = 4095 Plus Strand HSPs: Score = 152 (42.0 bits), Expect = 0.087, P = 0.083 Identities = 52/79 (65%), Positives = 52/79 (65%), Strand = Plus / Plus Query: 620 GCGCCGTGAAGAACGTTCTGGCCATCGGCTCTGGTGTAGCGAATGGCCTCGGCATGGGCC 679 | || ||||||||||| | ||| | || | |||| | | | || || ||| ||| Sbjct: 2692 GTGCTTTGAAGAACGTTGTTGCCTTAGGTTGTGGTTTCGTCGAAGGTCTAGGCTGGGGTA 2751 Query: 680 TCAACGCGCGTGCCGCCCT 698 |||||| ||| ||| | Sbjct: 2752 ACAACGCTTCTGCTGCCAT 2770 emb|Z48432|SCCHRIV42 S. cerevisiae chromosome IV left arm (EU) DNA segment (41372 bp) Length = 41,372 Plus Strand HSPs: Score = 152 (42.0 bits), Expect = 0.089, P = 0.085 Identities = 52/79 (65%), Positives = 52/79 (65%), Strand = Plus / Plus Query: 620 GCGCCGTGAAGAACGTTCTGGCCATCGGCTCTGGTGTAGCGAATGGCCTCGGCATGGGCC 679 | || ||||||||||| | ||| | || | |||| | | | || || ||| ||| Sbjct: 8383 GTGCTTTGAAGAACGTTGTTGCCTTAGGTTGTGGTTTCGTCGAAGGTCTAGGCTGGGGTA 8442 Query: 680 TCAACGCGCGTGCCGCCCT 698 |||||| ||| ||| | Sbjct: 8443 ACAACGCTTCTGCTGCCAT 8461 emb|X73036|CCGAPCD C.crispus GapC gene for glycolytic glyceraldehyde-3-phosphate dehydrogenase Length = 2746 Plus Strand HSPs: Score = 151 (41.7 bits), Expect = 0.10, P = 0.099 Identities = 43/59 (72%), Positives = 43/59 (72%), Strand = Plus / Plus Query: 471 CATCGAGGTGGCCACCGGCGTCTTCACGTGCGTCAGCATCGCCTCCGCCGACATCAATG 529 ||||| | ||||||||||||||||||| | || ||| ||||| || |||| | Sbjct: 1526 CATCGTCGAGGCCACCGGCGTCTTCACGCTCAAGGACAAGGCCGCCGCCCACTTCAAGG 1584 dbj|E06907|E06907 DNA encoding Streptomyces carbophilus cytochrome P-450 Length = 1233 Plus Strand HSPs: Score = 146 (40.3 bits), Expect = 0.26, P = 0.23 Identities = 38/49 (77%), Positives = 38/49 (77%), Strand = Plus / Plus Query: 479 TGGCCACCGGCGTCTTCACGTGCGTCAGCATCGCCTCCGCCGACATCAA 527 |||||| || | | || || ||| | |||||||| ||||||||||| | Sbjct: 875 TGGCCATCGCGGACATCGCGGGCGGCCGCATCGCCACCGCCGACATCGA 923 dbj|D30815|STMCYP450 Streptomyces carbophilus gene for cytochrome P-450sca-2, complete cds Length = 1274 Plus Strand HSPs: Score = 146 (40.3 bits), Expect = 0.26, P = 0.23 Identities = 38/49 (77%), Positives = 38/49 (77%), Strand = Plus / Plus Query: 479 TGGCCACCGGCGTCTTCACGTGCGTCAGCATCGCCTCCGCCGACATCAA 527 |||||| || | | || || ||| | |||||||| ||||||||||| | Sbjct: 909 TGGCCATCGCGGACATCGCGGGCGGCCGCATCGCCACCGCCGACATCGA 957 emb|Z96800|MTCY63 Mycobacterium tuberculosis cosmid Y63 Length = 38,330 Minus Strand HSPs: Score = 144 (39.8 bits), Expect = 0.41, P = 0.34 Identities = 40/54 (74%), Positives = 40/54 (74%), Strand = Minus / Plus Query: 794 TGGAGGTCGCCGAGGCCGGCGAGGCCGAAGACGGCACTGCCATCGCCGCCCAGC 741 | ||||| |||||||||||| | | ||| || | |||| |||||||| || Sbjct: 8209 TTGAGGTTGCCGAGGCCGGCCAAGTCGAGGATCGTCGTGCCGGCGCCGCCCTGC 8262 emb|X73034|CCGAPC C.crispus mRNA for glycolytic glyceraldehyde-3-phosphate dehydrogenase Length = 1165 Plus Strand HSPs: Score = 142 (39.2 bits), Expect = 0.57, P = 0.43 Identities = 42/59 (71%), Positives = 42/59 (71%), Strand = Plus / Plus Query: 471 CATCGAGGTGGCCACCGGCGTCTTCACGTGCGTCAGCATCGCCTCCGCCGACATCAATG 529 ||||| | ||||||||||||||||||| | || ||| |||| || |||| | Sbjct: 381 CATCGTCGAGGCCACCGGCGTCTTCACGCTCAAGGACAAGGCCGCCGCTCACTTCAAGG 439 gb|U68036|SCU68036 Streptomyces coelicolor bldKA, bldKB, bldKC, and bldkD genes, complete cds, and bldkE gene, partial cds Length = 6448 Plus Strand HSPs: Score = 139 (38.4 bits), Expect = 1.1, P = 0.66 Identities = 47/71 (66%), Positives = 47/71 (66%), Strand = Plus / Plus Query: 730 CTGACAGCCGCGCTGGGCGGCGATGGCAGTGCCGTCTTCGGCCTCGCCGGCCTCGGCGAC 789 ||||| | | ||||| || || | | ||||||| | ||| ||||||||||| | Sbjct: 3813 CTGACCGTCTCGCTGACCGTCGGTTCCCTGATCGTCTTCCTCATCGTCGGCCTCGGCGCC 3872 Query: 790 CTCCAACTGAC 800 || ||| | Sbjct: 3873 GGCCTGCTGGC 3883 gb|U73305|MMU73305 Mycobacterium mageritense superoxide dismutase (sod) gene, partial cds Length = 388 Plus Strand HSPs: Score = 137 (37.9 bits), Expect = 1.3, P = 0.72 Identities = 45/67 (67%), Positives = 45/67 (67%), Strand = Plus / Plus Query: 738 CGCGCTGGGCGGCGATGGCAGTGCCGTCTTCGGCCTCGCCGGCCTCGGCGACCTCCAACT 797 || ||| ||| || | |||||| ||||| || | |||||||||||| | || Sbjct: 274 CGGCCTGCAGGGCTCGGGTTGGGCCGTCCTCGGCTACGACAGCCTCGGCGACCGGCTGCT 333 Query: 798 GACGTGC 804 ||| | | Sbjct: 334 GACCTTC 340 gb|M38373|HLFGYRB Haloferax alicantei DNA gyrase subunit A and B (gyrA and gyrB) genes, 5' end and complete cds Length = 2550 Plus Strand HSPs: Score = 137 (37.9 bits), Expect = 1.5, P = 0.79 Identities = 57/94 (60%), Positives = 57/94 (60%), Strand = Plus / Plus Query: 420 CGAATTCCTCCCGAGCCCCCTGCTTTCTGTGCTCGCGGGCCCCAGCTTTGCCATCGAGGT 479 |||| || || | | || | | ||||||||||| | || ||||||||||| Sbjct: 509 CGAAGTCGTCGACAACTCCATCGACGAGGCGCTCGCGGGCCACTGCGACGCCATCGAGGT 568 Query: 480 GGCCACCGGCGTCTTCACGTGCGTCAGCATCGCC 513 ||| | || | | |||||| || || Sbjct: 569 CGCCCTCCACGAGGACGGCTCTGTCAGCGTCACC 602 emb|Z92669|MTCY8D5 Mycobacterium tuberculosis cosmid SCY08D5 Length = 40,185 Minus Strand HSPs: Score = 116 (32.1 bits), Expect = 1.6, Sum P(2) = 0.79 Identities = 32/43 (74%), Positives = 32/43 (74%), Strand = Minus / Plus Query: 787 CGCCGAGGCCGGCGAGGCCGAAGACGGCACTGCCATCGCCGCC 745 || ||||| | | || |||| ||| || |||||||||||| Sbjct: 4395 CGTCGAGGTAGTCAAGCCCGAGGACCGCGAAGCCATCGCCGCC 4437 Score = 113 (31.2 bits), Expect = 1.6, Sum P(2) = 0.79 Identities = 57/100 (57%), Positives = 57/100 (57%), Strand = Minus / Plus Query: 547 GCTGTAGGCGGCGAGCCACATTGATGTCGGCGGAGGCGATGCTGACGCACGTGAAGACGC 488 ||||| || | | | | | | | | | | || | | | | ||| | | || Sbjct: 30724 GCTGTGCGCCCGGCCCGAGGTAGTGGAAGTAGAACGGGACGTCGTTGTAGGTGTACAAGC 30783 Query: 487 CGGTGGCCACCTCGATGGCAAAGCTGGGGCCCGCGAGCAC 448 |||||||||| ||||| | || | ||||| ||| Sbjct: 30784 CGGTGGCCACGACGATGTTCAGCTCGGTGGCCGCGGCCAC 30823 gb|L26977|HLFINSVECA Shuttle vector pMDS20, complete sequence Length = 9983 Plus Strand HSPs: Score = 137 (37.9 bits), Expect = 1.6, P = 0.79 Identities = 57/94 (60%), Positives = 57/94 (60%), Strand = Plus / Plus Query: 420 CGAATTCCTCCCGAGCCCCCTGCTTTCTGTGCTCGCGGGCCCCAGCTTTGCCATCGAGGT 479 |||| || || | | || | | ||||||||||| | || ||||||||||| Sbjct: 5458 CGAAGTCGTCGACAACTCCATCGACGAGGCGCTCGCGGGCCACTGCGACGCCATCGAGGT 5517 Query: 480 GGCCACCGGCGTCTTCACGTGCGTCAGCATCGCC 513 ||| | || | | |||||| || || Sbjct: 5518 CGCCCTCCACGAGGACGGCTCTGTCAGCGTCACC 5551 gb|L26978|HLFINSVECB Haloferax volcanii gene. Length = 11,291 Plus Strand HSPs: Score = 137 (37.9 bits), Expect = 1.6, P = 0.79 Identities = 57/94 (60%), Positives = 57/94 (60%), Strand = Plus / Plus Query: 420 CGAATTCCTCCCGAGCCCCCTGCTTTCTGTGCTCGCGGGCCCCAGCTTTGCCATCGAGGT 479 |||| || || | | || | | ||||||||||| | || ||||||||||| Sbjct: 4751 CGAAGTCGTCGACAACTCCATCGACGAGGCGCTCGCGGGCCACTGCGACGCCATCGAGGT 4810 Query: 480 GGCCACCGGCGTCTTCACGTGCGTCAGCATCGCC 513 ||| | || | | |||||| || || Sbjct: 4811 CGCCCTCCACGAGGACGGCTCTGTCAGCGTCACC 4844 gb|U08602|SSU08602 Streptomyces sp. alpha-amylase (amy) and (urf2) genes, complete cds and putative catabolic regulator (urf1) gene, partial cds. Length = 3088 Minus Strand HSPs: Score = 130 (35.9 bits), Expect = 5.9, P = 1.0 Identities = 70/125 (56%), Positives = 70/125 (56%), Strand = Minus / Plus Query: 784 CGAGGCCGGCGAGGCCGAAGACGGCACTGCCATCGCCGCCCAGCGCGGCTGTCAGATCTC 725 ||| ||||| ||| ||| | | || | ||||||||||| | | || | | | | || Sbjct: 1147 CGACACCGGCAAGGACGAGGTCCGCTCCACCATCGCCGCCTACCTCGACGGCCTGCGGTC 1206 Query: 724 GAATCTCGAGCAGGCCCCGCATGATTAGGGCGGCACGCGCGTTGAGGCCCATGCCGAGGC 665 | | | | | | | | || || || | | | |||| | | || || Sbjct: 1207 AATGGGTGTCGACGGCTTCCGCATCGACGCCGCCAAGCACATGGCGGCCGACGACGTCGC 1266 Query: 664 CATTC 660 || | Sbjct: 1267 GATCC 1271 gb|U86087|MSU86087 Mycobacterium senegalense superoxide dismutase (SOD) gene, partial cds Length = 388 Plus Strand HSPs: Score = 128 (35.4 bits), Expect = 7.3, P = 1.0 Identities = 44/67 (65%), Positives = 44/67 (65%), Strand = Plus / Plus Query: 738 CGCGCTGGGCGGCGATGGCAGTGCCGTCTTCGGCCTCGCCGGCCTCGGCGACCTCCAACT 797 || ||| ||| ||| | || || ||||| || | |||||||||||| | || Sbjct: 274 CGGCCTGCAGGGCTCGGGCTGGGCGGTGCTCGGCTACGACAGCCTCGGCGACCGGCTGCT 333 Query: 798 GACGTGC 804 ||| | | Sbjct: 334 GACCTTC 340 gb|U43775|GCU43775 Glomerella cingulata secreted aspartic proteinase precursor (gcsap) gene, complete cds Length = 1608 Plus Strand HSPs: Score = 128 (35.4 bits), Expect = 8.5, P = 1.0 Identities = 32/40 (80%), Positives = 32/40 (80%), Strand = Plus / Plus Query: 483 CACCGGCGTCTTCACGTGCGTCAGCATCGCCTCCGCCGAC 522 |||||||| | |||| | ||||||||||| | | ||||| Sbjct: 945 CACCGGCGCCATCACCTACGTCAGCATCGACAACTCCGAC 984 gb|AC002073|HSAC002073 Human PAC clone DJ515N1 from 22q11.2-q22; HTGS phase 3, complete sequence [Homo sapiens] Length = 128,978 Plus Strand HSPs: Score = 128 (35.4 bits), Expect = 8.9, P = 1.0 Identities = 68/121 (56%), Positives = 68/121 (56%), Strand = Plus / Plus Query: 216 CATCACTTTCACCTCCGATGTGGAAAAGGCGTACAATGGTGCCGAGATCATTCTCTTCGT 275 |||||||||||||| | || ||| | || | || | ||||| || Sbjct: 39100 CATCACTTTCACCTGGGGGTGGGGGAAGCCAAGGAAAGCTGGTGGTTAACTTCTCACTGT 39159 Query: 276 CATCCCGACACAGTTCCTGCGCGGCTTCTTCGAGAAAAGCGGTGGCAACCTGATCGCCTA 335 | ||| || | ||| | || || | || ||| | | || | ||| |||| Sbjct: 39160 CTTCCTTACCTCTTCCCTCCAAGGAATCAGCTTGACAAGTGTTACCACCTGTATCTCCTA 39219 Query: 336 C 336 | Sbjct: 39220 C 39220 Parameters: V=100 B=50 H=0 P=4 -ctxfactor=2.00 E=10 Query ----- As Used ----- ----- Computed ---- Strand MatID Matrix name Lambda K H Lambda K H +1 0 +5,-4 0.192 0.173 0.357 same same same -1 0 +5,-4 0.192 0.173 0.357 same same same Query Strand MatID Length Eff.Length E S W T X E2 S2 +1 0 1125 1125 10. 124 11 0 73 0.024 82 -1 0 1125 1125 10. 124 11 0 73 0.024 82 Statistics: Query Expected Observed HSPs HSPs Strand MatID High Score High Score Reportable Reported +1 0 132 (36.5 bits) 5625 (1554.3 bits) 24 24 -1 0 132 (36.5 bits) 144 (39.8 bits) 4 4 Query Neighborhd Word Excluded Failed Successful Overlaps Strand MatID Words Hits Hits Extensions Extensions Excluded +1 0 1118 150974 12707 135186 3081 1 -1 0 1118 129277 9916 117174 2187 0 Database: Non-redundant GenBank+EMBL+DDBJ+PDB sequences Release date: September 4, 1997 Posted date: 7:19 AM EDT Sep 4, 1997 # of letters in database: 540,957,745 # of sequences in database: 349,525 # of database sequences satisfying E: 27 No. of states in DFA: 243 (243 KB) Total size of DFA: 270 KB (320 KB) Time to generate neighborhood: 0.01u 0.01s 0.02t Real: 00:00:00 No. of processors used: 4 Time to search database: 13.03u 0.72s 13.75t Real: 00:00:04 Total cpu time: 13.07u 0.75s 13.82t Real: 00:00:04