Parasite genome databases and genome research resources


Brugia Codon Usage Table

From:
NAKAMURA Yasukazu
yanakamu@lab.nig.ac.jp
National Institute of Genetics
Grad. Univ. for Advanced Studies

Prepared for the web by Mark Blaxter


Brugia malayi:


17 ORFs, 10167 codons
fields: [triplet] [frequency: per thousand] [number]


                       
UUU 17.9 182 UCU 9.1 93 UAU 16.7 170 UGU 8.1 82
UUC 12.8 130 UCC 5.1 52 UAC 8.7 88 UGC 6.1 62
UUA 16 163 UCA 15.9 162 UAA 1 10 UGA 0.1 1
UUG 21.8 222 UCG 6.6 67 UAG 0.6 6 UGG 8.7 88
                       
CUU 19.9 202 CCU 18 183 CAU 12.4 126 CGU 18.3 186
CUC 6.4 65 CCC 3.5 36 CAC 5.1 52 CGC 5.2 53
CUA 8.1 82 CCA 37.9 385 CAA 32.5 330 CGA 13.2 134
CUG 12.7 129 CCG 10.4 106 CAG 17.3 176 CGG 3.2 33
                       
AUU 28.7 292 ACU 13.8 140 AAU 31.4 319 AGU 10.2 104
AUC 11.8 120 ACC 7.2 73 AAC 10.4 106 AGC 7.6 77
AUA 12.1 123 ACA 18.6 189 AAA 47.8 486 AGA 9.6 98
AUG 23.5 239 ACG 7.8 79 AAG 20.9 212 AGG 3 31
                       
GUU 19.2 195 GCU 25.2 256 GAU 40.8 415 GGU 43.6 443
GUC 6.4 65 GCC 7.6 77 GAC 12.4 126 GGC 12.4 126
GUA 12.2 124 GCA 31.7 322 GAA 59.7 607 GGA 40.4 411
GUG 11.2 114 GCG 9.4 96 GAG 19.7 200 GGG 4.5 46